Misdiagnosis of mycorrhizas and inappropriate recycling of data can lead to false conclusions.
Identifieur interne : 000455 ( Main/Exploration ); précédent : 000454; suivant : 000456Misdiagnosis of mycorrhizas and inappropriate recycling of data can lead to false conclusions.
Auteurs : Mark Brundrett [Australie] ; Leho Tedersoo [Estonie]Source :
- The New phytologist [ 1469-8137 ] ; 2019.
Descripteurs français
- KwdFr :
- MESH :
- microbiologie : Plantes.
- physiologie : Mycorhizes.
- classification : Bases de données factuelles, Exactitude des données, Mycorhizes.
English descriptors
- KwdEn :
- MESH :
- classification : Mycorrhizae.
- microbiology : Plants.
- physiology : Mycorrhizae.
- Data Accuracy, Databases, Factual.
Abstract
We draw attention to a worrying trend for the uncritical use of 'recycled' mycorrhizal data to compile host species lists that include obvious errors or undertake risky analyses that correlate mycorrhizal colonisation levels with environmental or physiological factors despite inherent limitations in datasets. We are not suggesting that all meta-studies are wrong, only that more care should be taken to resolve what can safely be done with recycled mycorrhizal data in the future. We also recommend that mycorrhizal species lists should be checked against standard references since the majority of EM hosts and NM plant belong to families that are well resolved. However, additional research is required in cases where plant families have multiple root types within genera or occur in habitats where mycorrhizal associations are often suppressed (see Brundrett & Tedersoo, 2018). We hope that the mycorrhizal science community will work together more closely in the future to develop and enforce standards for mycorrhizal diagnosis and to share carefully corrected datasets for realistic meta-studies.
DOI: 10.1111/nph.15440
PubMed: 30191568
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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We are not suggesting that all meta-studies are wrong, only that more care should be taken to resolve what can safely be done with recycled mycorrhizal data in the future. We also recommend that mycorrhizal species lists should be checked against standard references since the majority of EM hosts and NM plant belong to families that are well resolved. However, additional research is required in cases where plant families have multiple root types within genera or occur in habitats where mycorrhizal associations are often suppressed (see Brundrett & Tedersoo, 2018). We hope that the mycorrhizal science community will work together more closely in the future to develop and enforce standards for mycorrhizal diagnosis and to share carefully corrected datasets for realistic meta-studies.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">30191568</PMID><DateCompleted><Year>2020</Year><Month>01</Month><Day>07</Day></DateCompleted><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1469-8137</ISSN><JournalIssue CitedMedium="Internet"><Volume>221</Volume><Issue>1</Issue><PubDate><Year>2019</Year><Month>01</Month></PubDate></JournalIssue><Title>The New phytologist</Title><ISOAbbreviation>New Phytol</ISOAbbreviation></Journal><ArticleTitle>Misdiagnosis of mycorrhizas and inappropriate recycling of data can lead to false conclusions.</ArticleTitle><Pagination><MedlinePgn>18-24</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1111/nph.15440</ELocationID><Abstract><AbstractText>We draw attention to a worrying trend for the uncritical use of 'recycled' mycorrhizal data to compile host species lists that include obvious errors or undertake risky analyses that correlate mycorrhizal colonisation levels with environmental or physiological factors despite inherent limitations in datasets. We are not suggesting that all meta-studies are wrong, only that more care should be taken to resolve what can safely be done with recycled mycorrhizal data in the future. We also recommend that mycorrhizal species lists should be checked against standard references since the majority of EM hosts and NM plant belong to families that are well resolved. However, additional research is required in cases where plant families have multiple root types within genera or occur in habitats where mycorrhizal associations are often suppressed (see Brundrett & Tedersoo, 2018). We hope that the mycorrhizal science community will work together more closely in the future to develop and enforce standards for mycorrhizal diagnosis and to share carefully corrected datasets for realistic meta-studies.</AbstractText><CopyrightInformation>© 2018 The Authors. New Phytologist © 2018 New Phytologist Trust.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Brundrett</LastName><ForeName>Mark</ForeName><Initials>M</Initials><Identifier Source="ORCID">0000-0002-2501-9037</Identifier><AffiliationInfo><Affiliation>School of Biological Sciences, University of Western Australia, 35 Stirling Highway, Crawley, WA, 6009, Australia.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Tedersoo</LastName><ForeName>Leho</ForeName><Initials>L</Initials><Identifier Source="ORCID">0000-0002-1635-1249</Identifier><AffiliationInfo><Affiliation>Natural History Museum, University of Tartu, 14a Ravila, Tartu, 50411, Estonia.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2018</Year><Month>09</Month><Day>07</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>New Phytol</MedlineTA><NlmUniqueID>9882884</NlmUniqueID><ISSNLinking>0028-646X</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><CommentsCorrectionsList><CommentsCorrections RefType="CommentIn"><RefSource>New Phytol. 2019 Dec;224(4):1415-1418</RefSource><PMID Version="1">31246312</PMID></CommentsCorrections></CommentsCorrectionsList><MeshHeadingList><MeshHeading><DescriptorName UI="D000068598" MajorTopicYN="Y">Data Accuracy</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D016208" MajorTopicYN="Y">Databases, Factual</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D038821" MajorTopicYN="N">Mycorrhizae</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010944" MajorTopicYN="N">Plants</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">databases</Keyword><Keyword MajorTopicYN="Y">diagnosis errors</Keyword><Keyword MajorTopicYN="Y">evolution</Keyword><Keyword MajorTopicYN="Y">meta-analysis</Keyword><Keyword MajorTopicYN="Y">mycorrhizal associations</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="pubmed"><Year>2018</Year><Month>9</Month><Day>8</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2020</Year><Month>1</Month><Day>8</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2018</Year><Month>9</Month><Day>8</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">30191568</ArticleId><ArticleId IdType="doi">10.1111/nph.15440</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Australie</li><li>Estonie</li></country></list><tree><country name="Australie"><noRegion><name sortKey="Brundrett, Mark" sort="Brundrett, Mark" uniqKey="Brundrett M" first="Mark" last="Brundrett">Mark Brundrett</name></noRegion></country><country name="Estonie"><noRegion><name sortKey="Tedersoo, Leho" sort="Tedersoo, Leho" uniqKey="Tedersoo L" first="Leho" last="Tedersoo">Leho Tedersoo</name></noRegion></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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